rpms/R-preprocessCore/F-11 R-preprocessCore.spec, NONE, 1.1 import.log, NONE, 1.1 preprocessCore_license, NONE, 1.1 .cvsignore, 1.1, 1.2 sources, 1.1, 1.2

Wed Aug 5 07:57:34 UTC 2009

Author: pingou

Update of /cvs/pkgs/rpms/R-preprocessCore/F-11
In directory cvs1.fedora.phx.redhat.com:/tmp/cvs-serv426/F-11

Modified Files:
	.cvsignore sources 
Added Files:
	R-preprocessCore.spec import.log preprocessCore_license 
Log Message:
Original import

--- NEW FILE R-preprocessCore.spec ---
%global packname  preprocessCore
%global bioc     2.4

Name:             R-%{packname}
Version:          1.6.0
Release:          2%{?dist}
Summary:          A collection of pre-processing functions

Group:            Applications/Engineering 
License:          LGPLv2+  
URL:              http://bioconductor.org/packages/%{bioc}/bioc/html/%{packname}.html
Source0:          http://bioconductor.org/packages/%{bioc}/bioc/src/contrib/%{packname}_%{version}.tar.gz
Source1:          preprocessCore_license
BuildRoot:        %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)

Requires:         R-methods
Requires(post):   R
Requires(postun): R
BuildRequires:    R-devel tetex-latex R-methods 

%package           devel
Summary:           Development files for %{name}        
Group:             Development/Libraries
Requires:          %{name} = %{version} 


%description
A library of core preprocessing routines

%description    devel
The %{name}-devel  package contains Header and libraries files for
developing applications that use %{name}

%prep
%setup -q -c -n %{packname}

%build

%install
rm -rf %{buildroot}

mkdir -p %{buildroot}%{_libdir}/R/library 
R CMD INSTALL %{packname} -l %{buildroot}%{_libdir}/R/library
# Clean up in advance of check
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -rf %{buildroot}%{_libdir}/R/library/R.css

## Keep the headers of place for the -devel
## see: https://www.redhat.com/archives/fedora-r-devel-list/2009-March/msg00001.html

install -m 664 -p %{SOURCE1}  %{buildroot}%{_libdir}/R/library/%{packname}

%check
%{_bindir}/R CMD check %{packname}

%clean
rm -rf %{buildroot}

%post
%{_R_make_search_index}

%postun
%{_R_make_search_index}

%files
%defattr(-, root, root, -)
#i386 arch
%dir %{_libdir}/R/library/%{packname}
%doc %{_libdir}/R/library/%{packname}/latex
%doc %{_libdir}/R/library/%{packname}/html
%doc %{_libdir}/R/library/%{packname}/DESCRIPTION
%doc %{_libdir}/R/library/%{packname}/man
%doc %{_libdir}/R/library/%{packname}/preprocessCore_license
%{_libdir}/R/library/%{packname}/CONTENTS
%{_libdir}/R/library/%{packname}/INDEX
%{_libdir}/R/library/%{packname}/NAMESPACE
%{_libdir}/R/library/%{packname}/Meta
%{_libdir}/R/library/%{packname}/R
%{_libdir}/R/library/%{packname}/libs
%{_libdir}/R/library/%{packname}/R-ex
%{_libdir}/R/library/%{packname}/help

%files          devel
%defattr(-,root,root,-)
%{_libdir}/R/library/%{packname}/include/

%changelog
* Tue Aug 04 2009 pingou <pingou at pingoured.fr> 1.6.0-2
- Add the file preprocessCore_license which contains the mail from upstream regarding the license

* Sat Aug 01 2009 pingou <pingou at pingoured.fr> 1.6.0-1
- initial package for Fedora


--- NEW FILE import.log ---
R-preprocessCore-1_6_0-2_fc11:F-11:R-preprocessCore-1.6.0-2.fc11.src.rpm:1249459033


--- NEW FILE preprocessCore_license ---
>From bmb at bmbolstad.com Sat Aug  1 21:11:42 2009
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Date: Sat, 1 Aug 2009 14:11:20 -0700 (PDT)
Subject: Re: preprocessCore license
From: bmb at bmbolstad.com
To: "Pierre-Yves" <pingou at pingoured.fr>
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The licence in the DESCRIPTION is the intended licence




> Dear Mr,
>
> My name is Pierre-Yves Chibon and I am involved in the linux
> distribution Fedora as packager.
> I am particularly taking care of R package and I come to the point of
> packaging your library preprocessCore for Fedora.
>
> In the process of review of the package [1] before its integration it
> comes to the view of the reviewer that there are some contradiction in
> the license of the library.
> The description file mentions LGPL version 2 or later while several of
> the C files in the src folder are under GPL version 2 or later.
>
> Could you please clarify the license of the library ?
>
> Thanks in advance for your help,
>
> Best regards,
>
> Pierre
>
>
> [1] https://bugzilla.redhat.com/show_bug.cgi?id=515080
>
>




Index: .cvsignore
===================================================================
RCS file: /cvs/pkgs/rpms/R-preprocessCore/F-11/.cvsignore,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -p -r1.1 -r1.2
--- .cvsignore	5 Aug 2009 06:16:17 -0000	1.1
+++ .cvsignore	5 Aug 2009 07:57:34 -0000	1.2
@@ -0,0 +1 @@
+preprocessCore_1.6.0.tar.gz


Index: sources
===================================================================
RCS file: /cvs/pkgs/rpms/R-preprocessCore/F-11/sources,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -p -r1.1 -r1.2
--- sources	5 Aug 2009 06:16:17 -0000	1.1
+++ sources	5 Aug 2009 07:57:34 -0000	1.2
@@ -0,0 +1 @@
+7a56f8a97da4f117b61c601e656a5a83  preprocessCore_1.6.0.tar.gz


