[Bug 244234] Review Request: R-maanova - Analysis of N-dye Micro Array using mixed model effect

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Summary: Review Request: R-maanova - Analysis of N-dye Micro Array using mixed model effect


https://bugzilla.redhat.com/show_bug.cgi?id=244234





------- Additional Comments From tibbs at math.uh.edu  2008-01-15 14:14 EST -------
Looks like R-qvalue made it all the way through the process, so I can look at
this again.  But it fails to build:

+ R CMD INSTALL maanova -l
/var/tmp/R-maanova-1.8.0-1.fc9-root-mockbuild/usr/lib64/R/library
/var/tmp/R-maanova-1.8.0-1.fc9-root-mockbuild/usr/lib64/R/library
* Installing *source* package 'maanova' ...
** libs
gcc -std=gnu99 -I/usr/include/R -I/usr/include/R  -I/usr/local/include    -fpic
 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector
--param=ssp-buffer-size=4 -m64 -mtune=generic -c makeratio.c -o makeratio.o
makeratio.c:16:15: error: R.h: No such file or directory
makeratio.c:17:19: error: Rmath.h: No such file or directory
makeratio.c:18:27: error: R_ext/PrtUtil.h: No such file or directory
makeratio.c:19:26: error: R_ext/Applic.h: No such file or directory
makeratio.c:20:26: error: R_ext/Random.h: No such file or directory
makeratio.c: In function 'makeratio':
makeratio.c:31: warning: implicit declaration of function 'R_alloc'
makeratio.c:31: warning: cast to pointer from integer of different size
make: *** [makeratio.o] Error 1
ERROR: compilation failed for package 'maanova'
** Removing
'/var/tmp/R-maanova-1.8.0-1.fc9-root-mockbuild/usr/lib64/R/library/maanova'
error: Bad exit status from /var/tmp/rpm-tmp.10911 (%install)

I added R-devel to the build dependencies and things build OK.

Aside from the usual rpmlint warnings, I get:
  R-maanova.x86_64: W: wrong-file-end-of-line-encoding 
   /usr/lib64/R/library/maanova/doc/abf1.tex
I'm not really sure it's worth fixing, but if you want to do so it should be
trivial.

I can't fetch the upstream source; the Souce0: URL is 404 for me.  I guess
they've moved on to 1.9.0 now.  Should I just go ahead and review this or would
you like to update again?

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