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Fedora 9 updates-testing report



The following builds have been pushed to Fedora 9 updates-testing

    R-Biobase-2.4.1-1.fc9
    R-BufferedMatrixMethods-1.8.0-3.fc9
    R-IRanges-1.2.3-1.fc9
    R-RUnit-0.4.22-1.fc9
    automake-1.11-2.fc9
    conexus-0.8.0-1.fc9
    dbus-cxx-0.3.3-1.fc9
    k3b-1.0.5-9.fc9
    lilypond-2.11.57-2.fc9
    mozplugger-1.12.1-1.fc9
    perl-Geo-IP-1.38-1.fc9
    perl-Getopt-Euclid-0.2.1-1.fc9
    php-ezc-Webdav-1.1-2.fc9
    python-fedora-0.3.13.1-1.fc9
    rb_libtorrent-0.12.1-2.fc9

Details about builds:


================================================================================
 R-Biobase-2.4.1-1.fc9 (FEDORA-2009-6663)
 Base functions for Bioconductor
--------------------------------------------------------------------------------
Update Information:

Update to the lastest releases of Bioconductor
--------------------------------------------------------------------------------
ChangeLog:

* Fri Jun 12 2009 pingou <pingou pingoured fr> 2.4.1-1
- Update to 2.4.1
- Remove bad french translation
--------------------------------------------------------------------------------


================================================================================
 R-BufferedMatrixMethods-1.8.0-3.fc9 (FEDORA-2009-6663)
 Microarray Data related methods that utlize BufferedMatrix
--------------------------------------------------------------------------------
Update Information:

Update to the lastest releases of Bioconductor
--------------------------------------------------------------------------------
ChangeLog:

* Fri Jun 12 2009 pingou <pingou pingoured fr> - 1.8.0-3
- Remove check to fix build which fails on missing dep affy
 (not really needed here though)
* Fri Jun 12 2009 pingou <pingou pingoured fr> - 1.8.0-2
- Add R-affyio as a R and BR
* Tue Apr 28 2009 pingou <pingou pingoured fr> - 1.8.0-1
- Update to Bioconductor 2.4 and R-2.9.0
* Sat Mar 21 2009 pingou <pingou pingoured fr> - 1.6.0-1
- Update to bioconductor 2.3
- Get rid of the patches since I moved the BuffuredMethods' header back in libdir
* Sat Mar 21 2009 Robert Scheck <robert fedoraproject org> - 1.3.0-4
- Rebuilt for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild
--------------------------------------------------------------------------------


================================================================================
 R-IRanges-1.2.3-1.fc9 (FEDORA-2009-6663)
 Low-level containers for storing sets of integer ranges
--------------------------------------------------------------------------------
Update Information:

Update to the lastest releases of Bioconductor
--------------------------------------------------------------------------------
ChangeLog:

* Fri Jun 12 2009 pingou <pingou pingoured fr> 1.2.3-1
- Update to 1.2.3
--------------------------------------------------------------------------------


================================================================================
 R-RUnit-0.4.22-1.fc9 (FEDORA-2009-6663)
 R Unit test framework
--------------------------------------------------------------------------------
Update Information:

Update to the lastest releases of Bioconductor
--------------------------------------------------------------------------------
ChangeLog:

* Thu Jun  4 2009 pingou <pingou pingoured fr> 0.4.22-1
- Update to 0.4.22
--------------------------------------------------------------------------------


================================================================================
 automake-1.11-2.fc9 (FEDORA-2009-6661)
 A GNU tool for automatically creating Makefiles
--------------------------------------------------------------------------------
ChangeLog:

* Mon May 25 2009 Stepan Kasal <skasal redhat com> 1.11-2
- re-enable make check
- Automake 1.11 requires autoconf 2.62 or later
* Mon May 25 2009 Karsten Hopp <karsten redhat com> 1.11-1
- update to automake 1.11
* Mon May 25 2009 Stepan Kasal <skasal redhat com> - 1.10.2-4
- fix the failing test, re-enable check
* Mon Feb 23 2009 Fedora Release Engineering <rel-eng lists fedoraproject org> - 1.10.2-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild
* Wed Jan 21 2009 Karsten Hopp <karsten redhat com> 1.10.2-2
- convert NEWS file to UTF-8 (#225302)
* Wed Jan 14 2009 Karsten Hopp <karsten redhat com> 1.10.2-1
- version 1.10.2
--------------------------------------------------------------------------------


================================================================================
 conexus-0.8.0-1.fc9 (FEDORA-2009-6549)
 C++ I/O communication library
--------------------------------------------------------------------------------
Update Information:

This release introduces dbus support using the dbus-cxx library and the dbus-
cxx-xml2cpp interface generator. To enable use the --enable-dbus configure
option. For now only a few key classes have DBus interfaces: generic endpoints,
IPv4 TCP and UDP endpoints, IPv4 TCP server, and IPv4 addresses.Several of the
flag-like options have had their accessor names changed to improve readability.
Typically these now have a is_someflag_enabled() and enable_someflag() style
naming with the former returning a bool and the latter accepting a bool. There
are also a few name changes to the IPv4 and IPv6 UDP classes to improve
readability as well; namely changing set_hops() to set_hop_limit(), et. al.
--------------------------------------------------------------------------------
ChangeLog:

* Thu Jun  4 2009 Rick L Vinyard Jr <rvinyard cs nmsu edu> - 0.8.0-1
- New release
- Added -dbus subpackage
* Tue May 26 2009 Rick L Vinyard Jr <rvinyard cs nmsu edu> - 0.7.0-2
- Removed extraneous sysfs-devel from gtkmm subpackage
* Thu May 21 2009 Rick L Vinyard Jr <rvinyard cs nmsu edu> - 0.7.0-1
- New release
- Added doc subpackage
- Removed HAL dependency
- Removed extraneous docs
- Added libudev0-devel dependency
--------------------------------------------------------------------------------


================================================================================
 dbus-cxx-0.3.3-1.fc9 (FEDORA-2009-6513)
 C++ bindings for the DBus library
--------------------------------------------------------------------------------
Update Information:

This release introduces a new macro DBUS_CXX_ITERATOR_SUPPORT to support types
that are not natively supported by dbus-cxx but can be static_cast<> to a
supported type. This is typically most useful for supporting enumeration types
.dbus-cxx-xml2cpp has been modified to use DBUS_CXX_ITERATOR_SUPPORT to support
castable types when generating proxy and adapter interfaces for both methods and
signals. The example computer-is-a has been modified to demonstrate the use of
dbus-cxx-xml2cpp and enums with both methods and signals.
--------------------------------------------------------------------------------
ChangeLog:

* Tue Jun 16 2009 Rick L Vinyard Jr <rvinyard cs nmsu edu> - 0.3.3-1
- New release
* Mon Jun 15 2009 Rick L Vinyard Jr <rvinyard cs nmsu edu> - 0.3.2-1
- New release
--------------------------------------------------------------------------------


================================================================================
 k3b-1.0.5-9.fc9 (FEDORA-2009-6524)
 CD/DVD burning application
--------------------------------------------------------------------------------
Update Information:

Another try at repairing reloading/verification of burned images.
--------------------------------------------------------------------------------
ChangeLog:

* Sat Jun 13 2009 Rex Dieter <rdieter fedoraproject org> - 0:1.0.5-9
- another try at a reload patch that works (kde#156684#c30)
- optimize scriptlets
* Wed Feb 25 2009 Fedora Release Engineering <rel-eng lists fedoraproject org> - 0:1.0.5-8
- Rebuilt for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild
* Wed Jan 21 2009 Rex Dieter <rdieter fedoraproject org> - 0:1.0.5-7
- Summary: omit "for KDE"
- add rhel portability to .spec
* Wed Oct  1 2008 Rex Dieter <rdieter fedoraproject org> - 0:1.0.5-6
- revert libdvdread header changes, fix build (#465115)
- (re)enable -devel on f9
* Wed Aug 27 2008 Rex Dieter <rdieter fedoraproject org> - 0:1.0.5-5
- resurrect -devel (!=f9), grow -libs (f10+, #341651)
- avoid auto*foo
- fix build on rawhide (libdvdread header changes)
- conditionalize i18n bits
* Thu Jul 31 2008 Rex Dieter <rdieter fedoraproject org> - 0:1.0.5-4
- try alternative fix for tray eject/reload (kde#156684)
--------------------------------------------------------------------------------
References:

  [ 1 ] Bug #440343 - k3b fails to verify written data
        https://bugzilla.redhat.com/show_bug.cgi?id=440343
  [ 2 ] Bug #444344 - k3b problem verifying burned CD iso image
        https://bugzilla.redhat.com/show_bug.cgi?id=444344
--------------------------------------------------------------------------------


================================================================================
 lilypond-2.11.57-2.fc9 (FEDORA-2009-6528)
 A typesetting system for music notation
--------------------------------------------------------------------------------
Update Information:

Corrected path for vim 7.2.
--------------------------------------------------------------------------------
ChangeLog:

* Mon Jun 15 2009 Jon Ciesla <limb jcomserv net> - 2.11.57-2
- Update for vim 7.2, BZ 503429.
--------------------------------------------------------------------------------
References:

  [ 1 ] Bug #503429 - ViM files for lilypond installed in the wrong location
        https://bugzilla.redhat.com/show_bug.cgi?id=503429
--------------------------------------------------------------------------------


================================================================================
 mozplugger-1.12.1-1.fc9 (FEDORA-2009-6556)
 A generic mozilla plug-in
--------------------------------------------------------------------------------
Update Information:

update to 1.12.1
--------------------------------------------------------------------------------
ChangeLog:

* Thu May 14 2009 Than Ngo <than redhat com> - 1.12.1-1
- 1.12.1
* Wed Feb 25 2009 Fedora Release Engineering <rel-eng lists fedoraproject org> - 1.10.1-4
- Rebuilt for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild
* Mon Aug 11 2008 Tom "spot" Callaway <tcallawa redhat com> 1.10.1-3
- fix license tag
* Thu Apr 10 2008 Karsten Hopp <karsten redhat com> 1.10.1-2
- use RPM_OPT_FLAGS (#249976, Ville Skyttä)
--------------------------------------------------------------------------------


================================================================================
 perl-Geo-IP-1.38-1.fc9 (FEDORA-2009-6637)
 Efficient Perl bindings for the GeoIP location database
--------------------------------------------------------------------------------
ChangeLog:

* Mon Jun 15 2009 Michael Fleming <mfleming+rpm thatfleminggent com> 1.38-1
- New upstream update (fixes some segfaults and .au timezone breakage)
--------------------------------------------------------------------------------


================================================================================
 perl-Getopt-Euclid-0.2.1-1.fc9 (FEDORA-2009-6604)
 Executable Uniform Command-Line Interface Descriptions
--------------------------------------------------------------------------------
Update Information:

Update to 0.2.1
--------------------------------------------------------------------------------
ChangeLog:

* Mon Jun 15 2009 Rasmus Ory Nielsen <ron ron dk> - 0.2.1-1
- Updated to 0.2.1
--------------------------------------------------------------------------------


================================================================================
 php-ezc-Webdav-1.1-2.fc9 (FEDORA-2009-6620)
 Set up and run your own WebDAV server
--------------------------------------------------------------------------------
References:

  [ 1 ] Bug #498721 - Review Request: php-ezc-Webdav - eZ Components Webdav
        https://bugzilla.redhat.com/show_bug.cgi?id=498721
--------------------------------------------------------------------------------


================================================================================
 python-fedora-0.3.13.1-1.fc9 (FEDORA-2009-6609)
 Python modules for talking to Fedora Infrastructure Services
--------------------------------------------------------------------------------
Update Information:

Update that can deal with the new packagedb.
--------------------------------------------------------------------------------
ChangeLog:

* Sat Jun 13 2009 Toshio Kuratomi <toshio fedoraproject org> - 0.3.13.1-1
- Merge 0.3.12.1 and 0.3.13 releases together.
* Sat Jun 13 2009 Toshio Kuratomi <toshio fedoraproject org> - 0.3.13-1
- New release.  Some new pkgdb API, defaultdict implementation, and a
  bugfix to response code from the shipped login controller.
* Thu Jun 11 2009 Ricky Zhou <ricky fedoraproject org> - 0.3.12.1-2
- Backport a patch to add a bugzilla_email entry.
* Wed Jun  3 2009 Ricky Zhou <ricky fedoraproject org> - 0.3.12.1-1
- Update for new FAS release.
--------------------------------------------------------------------------------


================================================================================
 rb_libtorrent-0.12.1-2.fc9 (FEDORA-2009-6619)
 A C++ BitTorrent library aiming to be the best alternative
--------------------------------------------------------------------------------
Update Information:

This release adds an upstream patch to fix a directory traversal vulnerability
which would allow a remote attacker to create or overwrite arbitrary files via a
".." (dot dot) and partial relative pathname in a specially-crafted torrent.
In addition to this, asio-devel has been added to the dependencies for the
rb_libtorrent-devel package - a fix already applied to the Fedora 10, 11, and
Development ("Rawhide") packages.
--------------------------------------------------------------------------------
ChangeLog:

* Sun Jun 14 2009 Peter Gordon <peter thecodergeek com> - 0.12.1-2
- Apply backported upstream patch to fix CVE-2009-1760 (arbitrary file
  overwrite vulnerability):
  + 0.12-CVE-2009-1760.diff
- Fixes security bug #505523.
- Add asio-devel as runtime dependency for the devel subpackage (#478589)
--------------------------------------------------------------------------------
References:

  [ 1 ] Bug #505523 - CVE-2009-1760 rb_libtorrent: arbitrary file overwrite vulnerability
        https://bugzilla.redhat.com/show_bug.cgi?id=505523
--------------------------------------------------------------------------------



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